.. currentmodule:: pandas .. _reshaping: .. ipython:: python :suppress: import numpy as np np.random.seed(123456) from pandas import * from pandas.core.reshape import * import pandas.util.testing as tm randn = np.random.randn np.set_printoptions(precision=4, suppress=True) from pandas.tools.tile import * ************************** Reshaping and Pivot Tables ************************** Reshaping by pivoting DataFrame objects --------------------------------------- .. ipython:: :suppress: In [1]: import pandas.util.testing as tm; tm.N = 3 In [2]: def unpivot(frame): ...: N, K = frame.shape ...: data = {'value' : frame.values.ravel('F'), ...: 'variable' : np.asarray(frame.columns).repeat(N), ...: 'date' : np.tile(np.asarray(frame.index), K)} ...: columns = ['date', 'variable', 'value'] ...: return DataFrame(data, columns=columns) ...: In [3]: df = unpivot(tm.makeTimeDataFrame()) Data is often stored in CSV files or databases in so-called "stacked" or "record" format: .. ipython:: python df For the curious here is how the above DataFrame was created: .. code-block:: python import pandas.util.testing as tm; tm.N = 3 def unpivot(frame): N, K = frame.shape data = {'value' : frame.values.ravel('F'), 'variable' : np.asarray(frame.columns).repeat(N), 'date' : np.tile(np.asarray(frame.index), K)} return DataFrame(data, columns=['date', 'variable', 'value']) df = unpivot(tm.makeTimeDataFrame()) To select out everything for variable ``A`` we could do: .. ipython:: python df[df['variable'] == 'A'] But suppose we wish to do time series operations with the variables. A better representation would be where the ``columns`` are the unique variables and an ``index`` of dates identifies individual observations. To reshape the data into this form, use the ``pivot`` function: .. ipython:: python df.pivot(index='date', columns='variable', values='value') If the ``values`` argument is omitted, and the input DataFrame has more than one column of values which are not used as column or index inputs to ``pivot``, then the resulting "pivoted" DataFrame will have :ref:`hierarchical columns ` whose topmost level indicates the respective value column: .. ipython:: python df['value2'] = df['value'] * 2 pivoted = df.pivot('date', 'variable') pivoted You of course can then select subsets from the pivoted DataFrame: .. ipython:: python pivoted['value2'] Note that this returns a view on the underlying data in the case where the data are homogeneously-typed. .. _reshaping.stacking: Reshaping by stacking and unstacking ------------------------------------ Closely related to the ``pivot`` function are the related ``stack`` and ``unstack`` functions currently available on Series and DataFrame. These functions are designed to work together with ``MultiIndex`` objects (see the section on :ref:`hierarchical indexing `). Here are essentially what these functions do: - ``stack``: "pivot" a level of the (possibly hierarchical) column labels, returning a DataFrame with an index with a new inner-most level of row labels. - ``unstack``: inverse operation from ``stack``: "pivot" a level of the (possibly hierarchical) row index to the column axis, producing a reshaped DataFrame with a new inner-most level of column labels. The clearest way to explain is by example. Let's take a prior example data set from the hierarchical indexing section: .. ipython:: python tuples = zip(*[['bar', 'bar', 'baz', 'baz', 'foo', 'foo', 'qux', 'qux'], ['one', 'two', 'one', 'two', 'one', 'two', 'one', 'two']]) index = MultiIndex.from_tuples(tuples, names=['first', 'second']) df = DataFrame(randn(8, 2), index=index, columns=['A', 'B']) df2 = df[:4] df2 The ``stack`` function "compresses" a level in the DataFrame's columns to produce either: - A Series, in the case of a simple column Index - A DataFrame, in the case of a ``MultiIndex`` in the columns If the columns have a ``MultiIndex``, you can choose which level to stack. The stacked level becomes the new lowest level in a ``MultiIndex`` on the columns: .. ipython:: python stacked = df2.stack() stacked With a "stacked" DataFrame or Series (having a ``MultiIndex`` as the ``index``), the inverse operation of ``stack`` is ``unstack``, which by default unstacks the **last level**: .. ipython:: python stacked.unstack() stacked.unstack(1) stacked.unstack(0) .. _reshaping.unstack_by_name: If the indexes have names, you can use the level names instead of specifying the level numbers: .. ipython:: python stacked.unstack('second') You may also stack or unstack more than one level at a time by passing a list of levels, in which case the end result is as if each level in the list were processed individually. These functions are intelligent about handling missing data and do not expect each subgroup within the hierarchical index to have the same set of labels. They also can handle the index being unsorted (but you can make it sorted by calling ``sortlevel``, of course). Here is a more complex example: .. ipython:: python columns = MultiIndex.from_tuples([('A', 'cat'), ('B', 'dog'), ('B', 'cat'), ('A', 'dog')], names=['exp', 'animal']) df = DataFrame(randn(8, 4), index=index, columns=columns) df2 = df.ix[[0, 1, 2, 4, 5, 7]] df2 As mentioned above, ``stack`` can be called with a ``level`` argument to select which level in the columns to stack: .. ipython:: python df2.stack('exp') df2.stack('animal') Unstacking when the columns are a ``MultiIndex`` is also careful about doing the right thing: .. ipython:: python df[:3].unstack(0) df2.unstack(1) .. _reshaping.melt: Reshaping by Melt ----------------- The ``melt`` function found in ``pandas.core.reshape`` is useful to massage a DataFrame into a format where one or more columns are identifier variables, while all other columns, considered measured variables, are "pivoted" to the row axis, leaving just two non-identifier columns, "variable" and "value". For instance, .. ipython:: python cheese = DataFrame({'first' : ['John', 'Mary'], 'last' : ['Doe', 'Bo'], 'height' : [5.5, 6.0], 'weight' : [130, 150]}) cheese melt(cheese, id_vars=['first', 'last']) Combining with stats and GroupBy -------------------------------- It should be no shock that combining ``pivot`` / ``stack`` / ``unstack`` with GroupBy and the basic Series and DataFrame statistical functions can produce some very expressive and fast data manipulations. .. ipython:: python df df.stack().mean(1).unstack() # same result, another way df.groupby(level=1, axis=1).mean() df.stack().groupby(level=1).mean() df.mean().unstack(0) Pivot tables and cross-tabulations ---------------------------------- .. _reshaping.pivot: The function ``pandas.pivot_table`` can be used to create spreadsheet-style pivot tables. It takes a number of arguments - ``data``: A DataFrame object - ``values``: a column or a list of columns to aggregate - ``rows``: list of columns to group by on the table rows - ``cols``: list of columns to group by on the table columns - ``aggfunc``: function to use for aggregation, defaulting to ``numpy.mean`` Consider a data set like this: .. ipython:: python df = DataFrame({'A' : ['one', 'one', 'two', 'three'] * 6, 'B' : ['A', 'B', 'C'] * 8, 'C' : ['foo', 'foo', 'foo', 'bar', 'bar', 'bar'] * 4, 'D' : np.random.randn(24), 'E' : np.random.randn(24)}) df We can produce pivot tables from this data very easily: .. ipython:: python pivot_table(df, values='D', rows=['A', 'B'], cols=['C']) pivot_table(df, values='D', rows=['B'], cols=['A', 'C'], aggfunc=np.sum) pivot_table(df, values=['D','E'], rows=['B'], cols=['A', 'C'], aggfunc=np.sum) The result object is a DataFrame having potentially hierarchical indexes on the rows and columns. If the ``values`` column name is not given, the pivot table will include all of the data that can be aggregated in an additional level of hierarchy in the columns: .. ipython:: python pivot_table(df, rows=['A', 'B'], cols=['C']) You can render a nice output of the table omitting the missing values by calling ``to_string`` if you wish: .. ipython:: python table = pivot_table(df, rows=['A', 'B'], cols=['C']) print table.to_string(na_rep='') Note that ``pivot_table`` is also available as an instance method on DataFrame. Cross tabulations ~~~~~~~~~~~~~~~~~ Use the ``crosstab`` function to compute a cross-tabulation of two (or more) factors. By default ``crosstab`` computes a frequency table of the factors unless an array of values and an aggregation function are passed. It takes a number of arguments - ``rows``: array-like, values to group by in the rows - ``cols``: array-like, values to group by in the columns - ``values``: array-like, optional, array of values to aggregate according to the factors - ``aggfunc``: function, optional, If no values array is passed, computes a frequency table - ``rownames``: sequence, default None, must match number of row arrays passed - ``colnames``: sequence, default None, if passed, must match number of column arrays passed - ``margins``: boolean, default False, Add row/column margins (subtotals) Any Series passed will have their name attributes used unless row or column names for the cross-tabulation are specified For example: .. ipython:: python foo, bar, dull, shiny, one, two = 'foo', 'bar', 'dull', 'shiny', 'one', 'two' a = np.array([foo, foo, bar, bar, foo, foo], dtype=object) b = np.array([one, one, two, one, two, one], dtype=object) c = np.array([dull, dull, shiny, dull, dull, shiny], dtype=object) crosstab(a, [b, c], rownames=['a'], colnames=['b', 'c']) .. _reshaping.pivot.margins: Adding margins (partial aggregates) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ If you pass ``margins=True`` to ``pivot_table``, special ``All`` columns and rows will be added with partial group aggregates across the categories on the rows and columns: .. ipython:: python df.pivot_table(rows=['A', 'B'], cols='C', margins=True, aggfunc=np.std) .. _reshaping.tile: Tiling ------ .. _reshaping.tile.cut: The ``cut`` function computes groupings for the values of the input array and is often used to transform continuous variables to discrete or categorical variables: .. ipython:: python ages = np.array([10, 15, 13, 12, 23, 25, 28, 59, 60]) cut(ages, bins=3) If the ``bins`` keyword is an integer, then equal-width bins are formed. Alternatively we can specify custom bin-edges: .. ipython:: python cut(ages, bins=[0, 18, 35, 70])